Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.65■□□□□ 0.58
Pde6aP27664 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.65■□□□□ 0.58
Pde6aP27664 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pde6aP27664 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pde6aP27664 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Pde6aP27664 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.65■□□□□ 0.58
Pde6aP27664 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pde6aP27664 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pde6aP27664 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pde6aP27664 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.64■□□□□ 0.57
Pde6aP27664 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.64■□□□□ 0.57
Pde6aP27664 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.64■□□□□ 0.57
Pde6aP27664 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pde6aP27664 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6aP27664 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pde6aP27664 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.63■□□□□ 0.57
Pde6aP27664 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pde6aP27664 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6aP27664 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pde6aP27664 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.62■□□□□ 0.57
Pde6aP27664 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pde6aP27664 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pde6aP27664 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.62■□□□□ 0.57
Pde6aP27664 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6aP27664 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Pde6aP27664 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.61■□□□□ 0.57
Pde6aP27664 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.61■□□□□ 0.57
Pde6aP27664 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Pde6aP27664 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.61■□□□□ 0.57
Pde6aP27664 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.61■□□□□ 0.57
Pde6aP27664 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.61■□□□□ 0.57
Pde6aP27664 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.61■□□□□ 0.57
Pde6aP27664 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.61■□□□□ 0.57
Pde6aP27664 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.61■□□□□ 0.57
Pde6aP27664 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms