Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.42□□□□□ -0.26
Col8a2P25318 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.42□□□□□ -0.26
Col8a2P25318 Mzt1-203ENSMUST00000227948 952 ntBASIC13.42□□□□□ -0.26
Col8a2P25318 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.42□□□□□ -0.26
Col8a2P25318 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.42□□□□□ -0.26
Col8a2P25318 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.42□□□□□ -0.26
Col8a2P25318 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Col8a2P25318 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col8a2P25318 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col8a2P25318 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Col8a2P25318 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Col8a2P25318 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.41□□□□□ -0.26
Col8a2P25318 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.41□□□□□ -0.26
Col8a2P25318 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.41□□□□□ -0.26
Col8a2P25318 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.41□□□□□ -0.26
Col8a2P25318 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.41□□□□□ -0.26
Col8a2P25318 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.41□□□□□ -0.26
Col8a2P25318 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.41□□□□□ -0.26
Col8a2P25318 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a2P25318 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.4□□□□□ -0.26
Col8a2P25318 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.4□□□□□ -0.26
Col8a2P25318 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.4□□□□□ -0.26
Col8a2P25318 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col8a2P25318 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a2P25318 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.4□□□□□ -0.27
Col8a2P25318 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.39□□□□□ -0.27
Col8a2P25318 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.39□□□□□ -0.27
Col8a2P25318 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col8a2P25318 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Haglr-201ENSMUST00000100000 2085 ntBASIC13.39□□□□□ -0.27
Col8a2P25318 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms