Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Aldh1a1P24549 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gm4899-201ENSMUST00000178708 719 ntBASIC17.21■□□□□ 0.35
Aldh1a1P24549 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gm27494-201ENSMUST00000184735 189 ntBASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gm5186-201ENSMUST00000218781 920 ntBASIC17.21■□□□□ 0.35
Aldh1a1P24549 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Aldh1a1P24549 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Aldh1a1P24549 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Aldh1a1P24549 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Aldh1a1P24549 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.34
Aldh1a1P24549 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
Aldh1a1P24549 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Aldh1a1P24549 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.19■□□□□ 0.34
Aldh1a1P24549 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Aldh1a1P24549 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.18■□□□□ 0.34
Aldh1a1P24549 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Aldh1a1P24549 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Aldh1a1P24549 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.17■□□□□ 0.34
Aldh1a1P24549 Gm15358-201ENSMUST00000119249 520 ntBASIC17.17■□□□□ 0.34
Aldh1a1P24549 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Aldh1a1P24549 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms