Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.55■□□□□ 0.24
Hoxd8P23463 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Gm23935-201ENSMUST00000102303 57 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Gm24270-201ENSMUST00000102326 57 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Gm24245-201ENSMUST00000157318 57 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Gm24513-201ENSMUST00000174964 138 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Auts2-212ENSMUST00000178555 309 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.55■□□□□ 0.24
Hoxd8P23463 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.55■□□□□ 0.24
Hoxd8P23463 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Hoxd8P23463 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxd8P23463 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Gm27397-201ENSMUST00000184997 107 ntBASIC16.54■□□□□ 0.24
Hoxd8P23463 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.54■□□□□ 0.24
Hoxd8P23463 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.54■□□□□ 0.24
Hoxd8P23463 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hoxd8P23463 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxd8P23463 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hoxd8P23463 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Hoxd8P23463 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Hoxd8P23463 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hoxd8P23463 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Hoxd8P23463 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.53■□□□□ 0.24
Hoxd8P23463 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.53■□□□□ 0.24
Hoxd8P23463 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxd8P23463 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxd8P23463 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxd8P23463 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxd8P23463 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hoxd8P23463 Gm9682-201ENSMUST00000197505 556 ntBASIC16.52■□□□□ 0.24
Hoxd8P23463 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.52■□□□□ 0.24
Hoxd8P23463 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hoxd8P23463 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hoxd8P23463 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Hoxd8P23463 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxd8P23463 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Hoxd8P23463 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxd8P23463 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxd8P23463 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hoxd8P23463 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hoxd8P23463 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.51■□□□□ 0.23
Hoxd8P23463 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.51■□□□□ 0.23
Hoxd8P23463 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.51■□□□□ 0.23
Hoxd8P23463 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.51■□□□□ 0.23
Hoxd8P23463 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.51■□□□□ 0.23
Hoxd8P23463 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hoxd8P23463 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxd8P23463 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.51■□□□□ 0.23
Hoxd8P23463 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxd8P23463 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms