Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl1P12850 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl1P12850 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl1P12850 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cxcl1P12850 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.34□□□□□ -0.27
Cxcl1P12850 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl1P12850 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl1P12850 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl1P12850 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Cxcl1P12850 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl1P12850 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.33□□□□□ -0.27
Cxcl1P12850 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl1P12850 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl1P12850 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl1P12850 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl1P12850 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl1P12850 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.33□□□□□ -0.28
Cxcl1P12850 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.33□□□□□ -0.28
Cxcl1P12850 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.33□□□□□ -0.28
Cxcl1P12850 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl1P12850 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl1P12850 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm715-201ENSMUST00000117865 831 ntBASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm20760-201ENSMUST00000179197 648 ntBASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm29707-201ENSMUST00000196325 491 ntBASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm21814-202ENSMUST00000203277 873 ntBASIC13.32□□□□□ -0.28
Cxcl1P12850 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cxcl1P12850 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.32□□□□□ -0.28
Cxcl1P12850 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl1P12850 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl1P12850 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms