Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hoxc6P10629 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc6P10629 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxc6P10629 Gm45167-201ENSMUST00000208007 322 ntBASIC17.8■□□□□ 0.44
Hoxc6P10629 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hoxc6P10629 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc6P10629 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc6P10629 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc6P10629 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc6P10629 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Hoxc6P10629 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hoxc6P10629 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc6P10629 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc6P10629 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc6P10629 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Gm4899-201ENSMUST00000178708 719 ntBASIC17.78■□□□□ 0.44
Hoxc6P10629 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.78■□□□□ 0.44
Hoxc6P10629 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxc6P10629 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxc6P10629 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc6P10629 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc6P10629 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc6P10629 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hoxc6P10629 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc6P10629 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc6P10629 Gm8344-201ENSMUST00000119813 856 ntBASIC17.77■□□□□ 0.44
Hoxc6P10629 Gm11025-201ENSMUST00000140773 466 ntBASIC17.77■□□□□ 0.44
Hoxc6P10629 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc6P10629 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc6P10629 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc6P10629 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc6P10629 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc6P10629 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.77■□□□□ 0.43
Hoxc6P10629 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc6P10629 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc6P10629 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Hoxc6P10629 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc6P10629 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hoxc6P10629 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc6P10629 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc6P10629 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc6P10629 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Hoxc6P10629 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc6P10629 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc6P10629 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc6P10629 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hoxc6P10629 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms