Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm11780-201ENSMUST00000136880 516 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.04■□□□□ 0.32
TnfP06804 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TnfP06804 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
TnfP06804 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm8825-201ENSMUST00000182565 998 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm4518-201ENSMUST00000182638 718 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.04■□□□□ 0.32
TnfP06804 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.04■□□□□ 0.32
TnfP06804 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.04■□□□□ 0.32
TnfP06804 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.04■□□□□ 0.32
TnfP06804 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.04■□□□□ 0.32
TnfP06804 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.03■□□□□ 0.32
TnfP06804 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TnfP06804 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Gm43514-201ENSMUST00000198852 424 ntBASIC17.03■□□□□ 0.32
TnfP06804 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.03■□□□□ 0.32
TnfP06804 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TnfP06804 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TnfP06804 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TnfP06804 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.02■□□□□ 0.32
TnfP06804 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TnfP06804 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.02■□□□□ 0.32
TnfP06804 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.02■□□□□ 0.32
TnfP06804 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 AW822252-206ENSMUST00000208904 237 ntBASIC17.02■□□□□ 0.32
TnfP06804 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TnfP06804 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TnfP06804 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TnfP06804 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TnfP06804 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TnfP06804 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TnfP06804 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TnfP06804 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Gm7230-201ENSMUST00000173026 815 ntBASIC17.01■□□□□ 0.31
TnfP06804 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.01■□□□□ 0.31
TnfP06804 Gm6089-201ENSMUST00000197666 938 ntBASIC17.01■□□□□ 0.31
TnfP06804 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TnfP06804 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TnfP06804 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TnfP06804 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.01■□□□□ 0.31
TnfP06804 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TnfP06804 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.01■□□□□ 0.31
TnfP06804 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TnfP06804 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TnfP06804 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TnfP06804 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TnfP06804 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TnfP06804 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TnfP06804 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms