Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.8■□□□□ 0.12
Hoxa4P06798 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.8■□□□□ 0.12
Hoxa4P06798 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.8■□□□□ 0.12
Hoxa4P06798 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Hoxa4P06798 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hoxa4P06798 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxa4P06798 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Hoxa4P06798 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.79■□□□□ 0.12
Hoxa4P06798 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.79■□□□□ 0.12
Hoxa4P06798 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Gm7506-201ENSMUST00000207758 815 ntBASIC15.79■□□□□ 0.12
Hoxa4P06798 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa4P06798 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa4P06798 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm4459-201ENSMUST00000118750 468 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm8825-201ENSMUST00000182565 998 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm4518-201ENSMUST00000182638 718 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm8655-201ENSMUST00000221159 852 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa4P06798 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.78■□□□□ 0.12
Hoxa4P06798 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa4P06798 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Hoxa4P06798 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Hoxa4P06798 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.77■□□□□ 0.12
Hoxa4P06798 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa4P06798 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Hoxa4P06798 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.77■□□□□ 0.12
Hoxa4P06798 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.77■□□□□ 0.12
Hoxa4P06798 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms