Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.28■□□□□ 0.04
Krt1P04104 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.28■□□□□ 0.04
Krt1P04104 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Gm18671-201ENSMUST00000214826 683 ntBASIC15.28■□□□□ 0.04
Krt1P04104 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.28■□□□□ 0.04
Krt1P04104 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Krt1P04104 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Krt1P04104 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Krt1P04104 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Krt1P04104 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.27■□□□□ 0.04
Krt1P04104 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.27■□□□□ 0.04
Krt1P04104 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt1P04104 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt1P04104 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Krt1P04104 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Krt1P04104 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt1P04104 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Krt1P04104 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Krt1P04104 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Krt1P04104 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt1P04104 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.27■□□□□ 0.03
Krt1P04104 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt1P04104 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.27■□□□□ 0.03
Krt1P04104 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Krt1P04104 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Krt1P04104 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Krt1P04104 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Krt1P04104 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt1P04104 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Krt1P04104 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.25■□□□□ 0.03
Krt1P04104 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Krt1P04104 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.25■□□□□ 0.03
Krt1P04104 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.25■□□□□ 0.03
Krt1P04104 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.25■□□□□ 0.03
Krt1P04104 Gm10033-202ENSMUST00000211874 928 ntBASIC15.25■□□□□ 0.03
Krt1P04104 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Krt1P04104 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Krt1P04104 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt1P04104 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Krt1P04104 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Krt1P04104 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.24■□□□□ 0.03
Krt1P04104 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Krt1P04104 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt1P04104 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt1P04104 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms