Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.09■□□□□ 0.01
IghmP01872 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
IghmP01872 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.09■□□□□ 0.01
IghmP01872 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.09■□□□□ 0.01
IghmP01872 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.09■□□□□ 0.01
IghmP01872 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Gm10252-201ENSMUST00000209541 832 ntBASIC15.09■□□□□ 0.01
IghmP01872 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
IghmP01872 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
IghmP01872 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.09■□□□□ 0.01
IghmP01872 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.09■□□□□ 0.01
IghmP01872 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
IghmP01872 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
IghmP01872 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IghmP01872 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
IghmP01872 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IghmP01872 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IghmP01872 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IghmP01872 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
IghmP01872 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.08■□□□□ 0.01
IghmP01872 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
IghmP01872 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.08■□□□□ 0
IghmP01872 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.08■□□□□ 0
IghmP01872 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
IghmP01872 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.08■□□□□ 0
IghmP01872 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.08■□□□□ 0
IghmP01872 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IghmP01872 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.07■□□□□ 0
IghmP01872 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.07■□□□□ 0
IghmP01872 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.07■□□□□ 0
IghmP01872 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
IghmP01872 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.07■□□□□ 0
IghmP01872 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.07■□□□□ 0
IghmP01872 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
IghmP01872 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.07■□□□□ 0
IghmP01872 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
IghmP01872 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
IghmP01872 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.06■□□□□ 0
IghmP01872 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
IghmP01872 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
IghmP01872 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.06■□□□□ 0
IghmP01872 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
IghmP01872 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.06■□□□□ 0
IghmP01872 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
IghmP01872 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
IghmP01872 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms