Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
CopeO89079 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Gm715-201ENSMUST00000117865 831 ntBASIC16.63■□□□□ 0.25
CopeO89079 Gm13168-201ENSMUST00000121771 632 ntBASIC16.63■□□□□ 0.25
CopeO89079 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.63■□□□□ 0.25
CopeO89079 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CopeO89079 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CopeO89079 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CopeO89079 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.62■□□□□ 0.25
CopeO89079 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CopeO89079 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.62■□□□□ 0.25
CopeO89079 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.62■□□□□ 0.25
CopeO89079 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.62■□□□□ 0.25
CopeO89079 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CopeO89079 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.62■□□□□ 0.25
CopeO89079 Gm18421-201ENSMUST00000204122 625 ntBASIC16.62■□□□□ 0.25
CopeO89079 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CopeO89079 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CopeO89079 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CopeO89079 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.61■□□□□ 0.25
CopeO89079 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CopeO89079 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CopeO89079 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
CopeO89079 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CopeO89079 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CopeO89079 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CopeO89079 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CopeO89079 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.6■□□□□ 0.25
CopeO89079 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.6■□□□□ 0.25
CopeO89079 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CopeO89079 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.6■□□□□ 0.25
CopeO89079 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.6■□□□□ 0.25
CopeO89079 Gm21814-202ENSMUST00000203277 873 ntBASIC16.6■□□□□ 0.25
CopeO89079 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.6■□□□□ 0.25
CopeO89079 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CopeO89079 Asic1-205ENSMUST00000228185 1818 ntBASIC16.6■□□□□ 0.25
CopeO89079 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CopeO89079 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms