Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Yme1l1O88967 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.8■□□□□ 0.28
Yme1l1O88967 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Yme1l1O88967 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Yme1l1O88967 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.79■□□□□ 0.28
Yme1l1O88967 Gm14701-201ENSMUST00000117156 348 ntBASIC16.79■□□□□ 0.28
Yme1l1O88967 Gm37153-201ENSMUST00000193637 231 ntBASIC16.79■□□□□ 0.28
Yme1l1O88967 Gm45167-201ENSMUST00000208007 322 ntBASIC16.79■□□□□ 0.28
Yme1l1O88967 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Yme1l1O88967 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.79■□□□□ 0.28
Yme1l1O88967 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Yme1l1O88967 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Yme1l1O88967 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.78■□□□□ 0.28
Yme1l1O88967 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.78■□□□□ 0.28
Yme1l1O88967 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.78■□□□□ 0.28
Yme1l1O88967 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Yme1l1O88967 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Yme1l1O88967 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Yme1l1O88967 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Yme1l1O88967 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Yme1l1O88967 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.77■□□□□ 0.28
Yme1l1O88967 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.77■□□□□ 0.28
Yme1l1O88967 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.77■□□□□ 0.27
Yme1l1O88967 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.77■□□□□ 0.27
Yme1l1O88967 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.77■□□□□ 0.27
Yme1l1O88967 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Yme1l1O88967 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Yme1l1O88967 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Yme1l1O88967 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.76■□□□□ 0.27
Yme1l1O88967 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.76■□□□□ 0.27
Yme1l1O88967 Gm14057-201ENSMUST00000120631 482 ntBASIC16.76■□□□□ 0.27
Yme1l1O88967 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.76■□□□□ 0.27
Yme1l1O88967 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Yme1l1O88967 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms