Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.9■□□□□ 0.94
Apaf1O88879 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Apaf1O88879 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Apaf1O88879 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Apaf1O88879 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Apaf1O88879 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Apaf1O88879 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Apaf1O88879 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.89■□□□□ 0.94
Apaf1O88879 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Apaf1O88879 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Apaf1O88879 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.89■□□□□ 0.94
Apaf1O88879 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Apaf1O88879 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Apaf1O88879 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.89■□□□□ 0.93
Apaf1O88879 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.89■□□□□ 0.93
Apaf1O88879 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Apaf1O88879 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Apaf1O88879 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.89■□□□□ 0.93
Apaf1O88879 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.88■□□□□ 0.93
Apaf1O88879 Gm13884-201ENSMUST00000118103 829 ntBASIC20.88■□□□□ 0.93
Apaf1O88879 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.88■□□□□ 0.93
Apaf1O88879 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Apaf1O88879 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Apaf1O88879 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Apaf1O88879 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Apaf1O88879 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Apaf1O88879 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Gm4459-201ENSMUST00000118750 468 ntBASIC20.87■□□□□ 0.93
Apaf1O88879 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.87■□□□□ 0.93
Apaf1O88879 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.87■□□□□ 0.93
Apaf1O88879 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Apaf1O88879 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Apaf1O88879 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Apaf1O88879 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Apaf1O88879 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.86■□□□□ 0.93
Apaf1O88879 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Apaf1O88879 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Apaf1O88879 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.85■□□□□ 0.93
Apaf1O88879 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.85■□□□□ 0.93
Apaf1O88879 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.85■□□□□ 0.93
Apaf1O88879 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.85■□□□□ 0.93
Apaf1O88879 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Apaf1O88879 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Apaf1O88879 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Apaf1O88879 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Apaf1O88879 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Apaf1O88879 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Apaf1O88879 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.84■□□□□ 0.93
Apaf1O88879 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Apaf1O88879 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms