Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Best1O88870 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Best1O88870 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.43■□□□□ 0.06
Best1O88870 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.42■□□□□ 0.06
Best1O88870 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Best1O88870 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.42■□□□□ 0.06
Best1O88870 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.42■□□□□ 0.06
Best1O88870 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Best1O88870 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.42■□□□□ 0.06
Best1O88870 Gm8344-201ENSMUST00000119813 856 ntBASIC15.42■□□□□ 0.06
Best1O88870 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Mir5131-201ENSMUST00000175426 93 ntBASIC15.42■□□□□ 0.06
Best1O88870 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.42■□□□□ 0.06
Best1O88870 Gm6443-201ENSMUST00000203599 874 ntBASIC15.42■□□□□ 0.06
Best1O88870 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Best1O88870 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.42■□□□□ 0.06
Best1O88870 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.42■□□□□ 0.06
Best1O88870 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Best1O88870 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Best1O88870 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Best1O88870 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Best1O88870 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Gm12350-201ENSMUST00000121208 462 ntBASIC15.41■□□□□ 0.06
Best1O88870 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Best1O88870 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
Best1O88870 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Best1O88870 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Best1O88870 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.41■□□□□ 0.06
Best1O88870 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.41■□□□□ 0.06
Best1O88870 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Best1O88870 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Best1O88870 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Best1O88870 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Best1O88870 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.4■□□□□ 0.06
Best1O88870 Gm7222-201ENSMUST00000117512 906 ntBASIC15.4■□□□□ 0.06
Best1O88870 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Best1O88870 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.4■□□□□ 0.06
Best1O88870 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Mir5126-201ENSMUST00000175513 77 ntBASIC15.4■□□□□ 0.06
Best1O88870 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.4■□□□□ 0.06
Best1O88870 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.4■□□□□ 0.06
Best1O88870 AV026068-213ENSMUST00000223675 1171 ntBASIC15.4■□□□□ 0.06
Best1O88870 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Best1O88870 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Best1O88870 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.4■□□□□ 0.06
Best1O88870 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.4■□□□□ 0.06
Best1O88870 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Best1O88870 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Best1O88870 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Best1O88870 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Best1O88870 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Best1O88870 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms