Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cops6O88545 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Cops6O88545 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.6■□□□□ 0.73
Cops6O88545 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops6O88545 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cops6O88545 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.59■□□□□ 0.73
Cops6O88545 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Cops6O88545 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.59■□□□□ 0.73
Cops6O88545 Gm2213-201ENSMUST00000197485 688 ntBASIC19.59■□□□□ 0.73
Cops6O88545 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cops6O88545 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.59■□□□□ 0.73
Cops6O88545 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops6O88545 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cops6O88545 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.58■□□□□ 0.73
Cops6O88545 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cops6O88545 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cops6O88545 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.58■□□□□ 0.72
Cops6O88545 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.58■□□□□ 0.72
Cops6O88545 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cops6O88545 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops6O88545 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cops6O88545 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Gm11764-201ENSMUST00000120221 623 ntBASIC19.57■□□□□ 0.72
Cops6O88545 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.57■□□□□ 0.72
Cops6O88545 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.57■□□□□ 0.72
Cops6O88545 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.57■□□□□ 0.72
Cops6O88545 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Cops6O88545 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.57■□□□□ 0.72
Cops6O88545 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.57■□□□□ 0.72
Cops6O88545 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cops6O88545 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.56■□□□□ 0.72
Cops6O88545 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Gm13216-201ENSMUST00000117145 591 ntBASIC19.56■□□□□ 0.72
Cops6O88545 Gm4995-201ENSMUST00000117247 432 ntBASIC19.56■□□□□ 0.72
Cops6O88545 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.56■□□□□ 0.72
Cops6O88545 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.56■□□□□ 0.72
Cops6O88545 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.56■□□□□ 0.72
Cops6O88545 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops6O88545 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.55■□□□□ 0.72
Cops6O88545 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cops6O88545 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Cops6O88545 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.55■□□□□ 0.72
Cops6O88545 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms