Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cops4O88544 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cops4O88544 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cops4O88544 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cops4O88544 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Gm13168-201ENSMUST00000121771 632 ntBASIC14.89□□□□□ -0.03
Cops4O88544 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cops4O88544 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Cops4O88544 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cops4O88544 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cops4O88544 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.88□□□□□ -0.03
Cops4O88544 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cops4O88544 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.88□□□□□ -0.03
Cops4O88544 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.88□□□□□ -0.03
Cops4O88544 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cops4O88544 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cops4O88544 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cops4O88544 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.87□□□□□ -0.03
Cops4O88544 Gm12085-201ENSMUST00000119263 940 ntBASIC14.87□□□□□ -0.03
Cops4O88544 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.87□□□□□ -0.03
Cops4O88544 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cops4O88544 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops4O88544 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.87□□□□□ -0.03
Cops4O88544 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.86□□□□□ -0.03
Cops4O88544 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Cops4O88544 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cops4O88544 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.86□□□□□ -0.03
Cops4O88544 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.86□□□□□ -0.03
Cops4O88544 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cops4O88544 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.86□□□□□ -0.03
Cops4O88544 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.86□□□□□ -0.03
Cops4O88544 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms