Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.04■□□□□ -0
Tulp3O88413 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.04■□□□□ -0
Tulp3O88413 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Mir1199-201ENSMUST00000117015 119 ntBASIC15.04■□□□□ -0
Tulp3O88413 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.04■□□□□ -0
Tulp3O88413 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.04■□□□□ -0
Tulp3O88413 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.04■□□□□ -0
Tulp3O88413 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tulp3O88413 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Tulp3O88413 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.03■□□□□ -0
Tulp3O88413 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.03■□□□□ -0
Tulp3O88413 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.03■□□□□ -0
Tulp3O88413 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Tulp3O88413 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tulp3O88413 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.02■□□□□ -0
Tulp3O88413 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tulp3O88413 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Tulp3O88413 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.02■□□□□ -0
Tulp3O88413 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.02■□□□□ -0
Tulp3O88413 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.02■□□□□ -0
Tulp3O88413 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.02■□□□□ -0
Tulp3O88413 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Tulp3O88413 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Tulp3O88413 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Tulp3O88413 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tulp3O88413 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Tulp3O88413 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tulp3O88413 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tulp3O88413 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.01□□□□□ -0.01
Tulp3O88413 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tulp3O88413 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.01□□□□□ -0.01
Tulp3O88413 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Gm36967-201ENSMUST00000193814 266 ntBASIC15.01□□□□□ -0.01
Tulp3O88413 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tulp3O88413 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tulp3O88413 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms