Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pdlim1O70400 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.87■□□□□ 0.13
Pdlim1O70400 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.87■□□□□ 0.13
Pdlim1O70400 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pdlim1O70400 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Pdlim1O70400 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdlim1O70400 Gm25406-201ENSMUST00000157599 105 ntBASIC15.86■□□□□ 0.13
Pdlim1O70400 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.86■□□□□ 0.13
Pdlim1O70400 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdlim1O70400 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pdlim1O70400 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim1O70400 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdlim1O70400 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Pdlim1O70400 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim1O70400 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.84■□□□□ 0.13
Pdlim1O70400 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.84■□□□□ 0.13
Pdlim1O70400 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pdlim1O70400 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim1O70400 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms