Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.6□□□□□ -0.07
Pdlim3O70209 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.6□□□□□ -0.07
Pdlim3O70209 Gm11539-201ENSMUST00000119837 557 ntBASIC14.6□□□□□ -0.07
Pdlim3O70209 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.6□□□□□ -0.07
Pdlim3O70209 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.6□□□□□ -0.07
Pdlim3O70209 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pdlim3O70209 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim3O70209 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim3O70209 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pdlim3O70209 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim3O70209 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Gm3375-201ENSMUST00000203929 796 ntBASIC14.59□□□□□ -0.07
Pdlim3O70209 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.59□□□□□ -0.07
Pdlim3O70209 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pdlim3O70209 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim3O70209 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim3O70209 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim3O70209 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim3O70209 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim3O70209 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim3O70209 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.58□□□□□ -0.08
Pdlim3O70209 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdlim3O70209 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Pdlim3O70209 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.58□□□□□ -0.08
Pdlim3O70209 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.58□□□□□ -0.08
Pdlim3O70209 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.58□□□□□ -0.08
Pdlim3O70209 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdlim3O70209 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim3O70209 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Gm27463-201ENSMUST00000183569 57 ntBASIC14.57□□□□□ -0.08
Pdlim3O70209 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms