Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rdh5O55240 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Rdh5O55240 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.25■□□□□ 0.03
Rdh5O55240 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rdh5O55240 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh5O55240 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rdh5O55240 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rdh5O55240 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Gm11950-201ENSMUST00000121615 838 ntBASIC15.24■□□□□ 0.03
Rdh5O55240 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.24■□□□□ 0.03
Rdh5O55240 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Rdh5O55240 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.24■□□□□ 0.03
Rdh5O55240 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh5O55240 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rdh5O55240 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.23■□□□□ 0.03
Rdh5O55240 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.23■□□□□ 0.03
Rdh5O55240 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rdh5O55240 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.23■□□□□ 0.03
Rdh5O55240 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rdh5O55240 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.23■□□□□ 0.03
Rdh5O55240 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rdh5O55240 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh5O55240 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rdh5O55240 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Rdh5O55240 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.22■□□□□ 0.03
Rdh5O55240 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Gm9103-201ENSMUST00000119371 405 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms