Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pde6dO55057 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pde6dO55057 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 App-207ENSMUST00000227737 2827 ntBASIC12.74□□□□□ -0.37
Pde6dO55057 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pde6dO55057 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Pde6dO55057 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Gm6211-202ENSMUST00000167849 925 ntBASIC12.73□□□□□ -0.37
Pde6dO55057 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Gm27000-201ENSMUST00000182943 842 ntBASIC12.73□□□□□ -0.37
Pde6dO55057 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pde6dO55057 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6dO55057 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Pde6dO55057 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pde6dO55057 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.72□□□□□ -0.37
Pde6dO55057 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pde6dO55057 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.72□□□□□ -0.37
Pde6dO55057 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.72□□□□□ -0.37
Pde6dO55057 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pde6dO55057 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.72□□□□□ -0.37
Pde6dO55057 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.72□□□□□ -0.37
Pde6dO55057 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6dO55057 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pde6dO55057 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Pde6dO55057 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.71□□□□□ -0.37
Pde6dO55057 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Pde6dO55057 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pde6dO55057 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pde6dO55057 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6dO55057 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Gm24841-201ENSMUST00000158676 357 ntBASIC12.71□□□□□ -0.37
Pde6dO55057 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.71□□□□□ -0.37
Pde6dO55057 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
Pde6dO55057 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6dO55057 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6dO55057 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6dO55057 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pde6dO55057 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6dO55057 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.71□□□□□ -0.38
Pde6dO55057 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6dO55057 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms