Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trdmt1O55055 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
Trdmt1O55055 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.67■□□□□ 0.42
Trdmt1O55055 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trdmt1O55055 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.67■□□□□ 0.42
Trdmt1O55055 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Gm15358-201ENSMUST00000119249 520 ntBASIC17.67■□□□□ 0.42
Trdmt1O55055 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.67■□□□□ 0.42
Trdmt1O55055 Gm26308-201ENSMUST00000157768 69 ntBASIC17.67■□□□□ 0.42
Trdmt1O55055 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.67■□□□□ 0.42
Trdmt1O55055 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.67■□□□□ 0.42
Trdmt1O55055 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trdmt1O55055 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdmt1O55055 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.66■□□□□ 0.42
Trdmt1O55055 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Trdmt1O55055 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trdmt1O55055 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdmt1O55055 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trdmt1O55055 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.65■□□□□ 0.42
Trdmt1O55055 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trdmt1O55055 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trdmt1O55055 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.64■□□□□ 0.42
Trdmt1O55055 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.64■□□□□ 0.42
Trdmt1O55055 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.64■□□□□ 0.41
Trdmt1O55055 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.64■□□□□ 0.41
Trdmt1O55055 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.64■□□□□ 0.41
Trdmt1O55055 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.64■□□□□ 0.41
Trdmt1O55055 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.64■□□□□ 0.41
Trdmt1O55055 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trdmt1O55055 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.64■□□□□ 0.41
Trdmt1O55055 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdmt1O55055 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.63■□□□□ 0.41
Trdmt1O55055 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.63■□□□□ 0.41
Trdmt1O55055 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms