Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Prom1O54990 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prom1O54990 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Prom1O54990 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.7■□□□□ 0.42
Prom1O54990 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Prom1O54990 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.7■□□□□ 0.42
Prom1O54990 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Gm45167-201ENSMUST00000208007 322 ntBASIC17.7■□□□□ 0.42
Prom1O54990 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Prom1O54990 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prom1O54990 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.69■□□□□ 0.42
Prom1O54990 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.69■□□□□ 0.42
Prom1O54990 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.69■□□□□ 0.42
Prom1O54990 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.69■□□□□ 0.42
Prom1O54990 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.69■□□□□ 0.42
Prom1O54990 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prom1O54990 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.68■□□□□ 0.42
Prom1O54990 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.68■□□□□ 0.42
Prom1O54990 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.68■□□□□ 0.42
Prom1O54990 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prom1O54990 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prom1O54990 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Prom1O54990 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.67■□□□□ 0.42
Prom1O54990 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Prom1O54990 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Prom1O54990 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.67■□□□□ 0.42
Prom1O54990 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.67■□□□□ 0.42
Prom1O54990 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.67■□□□□ 0.42
Prom1O54990 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Prom1O54990 Gm4899-201ENSMUST00000178708 719 ntBASIC17.67■□□□□ 0.42
Prom1O54990 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.67■□□□□ 0.42
Prom1O54990 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.67■□□□□ 0.42
Prom1O54990 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Prom1O54990 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.67■□□□□ 0.42
Prom1O54990 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prom1O54990 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.66■□□□□ 0.42
Prom1O54990 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms