Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb3O54890 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb3O54890 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Itgb3O54890 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.02■□□□□ 0.32
Itgb3O54890 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb3O54890 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.02■□□□□ 0.32
Itgb3O54890 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb3O54890 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Itgb3O54890 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.02■□□□□ 0.31
Itgb3O54890 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb3O54890 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Itgb3O54890 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Itgb3O54890 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Itgb3O54890 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.01■□□□□ 0.31
Itgb3O54890 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44357-201ENSMUST00000195897 142 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm19658-201ENSMUST00000196231 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44367-201ENSMUST00000196836 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44350-201ENSMUST00000197197 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44390-201ENSMUST00000197533 144 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44313-201ENSMUST00000198018 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44486-201ENSMUST00000198508 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44314-201ENSMUST00000199263 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44394-201ENSMUST00000199558 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44484-201ENSMUST00000199873 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44466-201ENSMUST00000200264 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Gm44359-201ENSMUST00000200671 138 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.01■□□□□ 0.31
Itgb3O54890 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.01■□□□□ 0.31
Itgb3O54890 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb3O54890 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Itgb3O54890 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17■□□□□ 0.31
Itgb3O54890 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Itgb3O54890 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17■□□□□ 0.31
Itgb3O54890 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Itgb3O54890 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Itgb3O54890 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Itgb3O54890 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Itgb3O54890 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.99■□□□□ 0.31
Itgb3O54890 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.99■□□□□ 0.31
Itgb3O54890 Gm9172-201ENSMUST00000212092 954 ntBASIC16.99■□□□□ 0.31
Itgb3O54890 Rps4l-201ENSMUST00000071745 943 ntBASIC16.99■□□□□ 0.31
Itgb3O54890 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Itgb3O54890 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Itgb3O54890 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Itgb3O54890 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.99■□□□□ 0.31
Itgb3O54890 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Itgb3O54890 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Itgb3O54890 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Itgb3O54890 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Itgb3O54890 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Itgb3O54890 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Itgb3O54890 Gm4459-201ENSMUST00000118750 468 ntBASIC16.98■□□□□ 0.31
Itgb3O54890 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Itgb3O54890 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.98■□□□□ 0.31
Itgb3O54890 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.98■□□□□ 0.31
Itgb3O54890 Gm6296-201ENSMUST00000222599 943 ntBASIC16.98■□□□□ 0.31
Itgb3O54890 Mzt1-203ENSMUST00000227948 952 ntBASIC16.98■□□□□ 0.31
Itgb3O54890 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Itgb3O54890 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Itgb3O54890 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms