Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ccr6O54689 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccr6O54689 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccr6O54689 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccr6O54689 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Ccr6O54689 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccr6O54689 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccr6O54689 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Ccr6O54689 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.54□□□□□ -0.24
Ccr6O54689 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.54□□□□□ -0.24
Ccr6O54689 Gm11249-201ENSMUST00000117071 859 ntBASIC13.54□□□□□ -0.24
Ccr6O54689 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccr6O54689 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Il3ra-202ENSMUST00000223589 738 ntBASIC13.54□□□□□ -0.24
Ccr6O54689 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Ccr6O54689 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.54□□□□□ -0.24
Ccr6O54689 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccr6O54689 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ccr6O54689 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccr6O54689 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccr6O54689 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccr6O54689 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Ccr6O54689 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Gm13158-201ENSMUST00000122007 736 ntBASIC13.53□□□□□ -0.24
Ccr6O54689 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Ccr6O54689 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.53□□□□□ -0.24
Ccr6O54689 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.53□□□□□ -0.24
Ccr6O54689 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.53□□□□□ -0.24
Ccr6O54689 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccr6O54689 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccr6O54689 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccr6O54689 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.52□□□□□ -0.24
Ccr6O54689 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccr6O54689 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccr6O54689 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccr6O54689 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccr6O54689 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccr6O54689 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccr6O54689 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccr6O54689 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.52□□□□□ -0.25
Ccr6O54689 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccr6O54689 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccr6O54689 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccr6O54689 Gm36967-201ENSMUST00000193814 266 ntBASIC13.52□□□□□ -0.25
Ccr6O54689 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccr6O54689 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms