Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm4518-201ENSMUST00000182638 718 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm6266-201ENSMUST00000203844 806 ntBASIC15.06■□□□□ 0
Abca4O35600 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.06■□□□□ 0
Abca4O35600 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.06■□□□□ 0
Abca4O35600 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Abca4O35600 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.06■□□□□ 0
Abca4O35600 Syt7-205ENSMUST00000224135 1557 ntBASIC15.06■□□□□ 0
Abca4O35600 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Gm11478-201ENSMUST00000117851 599 ntBASIC15.06■□□□□ 0
Abca4O35600 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.06■□□□□ 0
Abca4O35600 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.06■□□□□ 0
Abca4O35600 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.06■□□□□ 0
Abca4O35600 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.06■□□□□ 0
Abca4O35600 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.06■□□□□ 0
Abca4O35600 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.06■□□□□ 0
Abca4O35600 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Abca4O35600 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.05■□□□□ 0
Abca4O35600 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.05■□□□□ 0
Abca4O35600 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca4O35600 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca4O35600 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abca4O35600 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.05■□□□□ -0
Abca4O35600 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Abca4O35600 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Abca4O35600 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca4O35600 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.05■□□□□ -0
Abca4O35600 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca4O35600 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca4O35600 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca4O35600 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.04■□□□□ -0
Abca4O35600 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.04■□□□□ -0
Abca4O35600 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Mir3102-201ENSMUST00000175555 104 ntBASIC15.04■□□□□ -0
Abca4O35600 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Abca4O35600 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Abca4O35600 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Abca4O35600 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Abca4O35600 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Gm15487-201ENSMUST00000122373 465 ntBASIC15.04■□□□□ -0
Abca4O35600 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.04■□□□□ -0
Abca4O35600 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Abca4O35600 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca4O35600 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abca4O35600 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Abca4O35600 Gm18246-201ENSMUST00000221023 728 ntBASIC15.03■□□□□ -0
Abca4O35600 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Abca4O35600 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abca4O35600 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.03■□□□□ -0
Abca4O35600 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.03■□□□□ -0
Abca4O35600 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.03■□□□□ -0
Abca4O35600 Gm24158-201ENSMUST00000175263 71 ntBASIC15.03■□□□□ -0
Abca4O35600 Gm29541-201ENSMUST00000191351 678 ntBASIC15.03■□□□□ -0
Abca4O35600 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.03■□□□□ -0
Abca4O35600 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca4O35600 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Abca4O35600 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms