Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Clcn6O35454 Gm44863-201ENSMUST00000207613 1422 ntBASIC17.3■□□□□ 0.36
Clcn6O35454 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.3■□□□□ 0.36
Clcn6O35454 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Gm4974-201ENSMUST00000209974 875 ntBASIC17.3■□□□□ 0.36
Clcn6O35454 AC118006.2-201ENSMUST00000224167 962 ntBASIC17.3■□□□□ 0.36
Clcn6O35454 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Clcn6O35454 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn6O35454 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn6O35454 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.3■□□□□ 0.36
Clcn6O35454 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.29■□□□□ 0.36
Clcn6O35454 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.29■□□□□ 0.36
Clcn6O35454 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Gm7680-201ENSMUST00000216198 1348 ntBASIC17.29■□□□□ 0.36
Clcn6O35454 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.29■□□□□ 0.36
Clcn6O35454 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Mir706-201ENSMUST00000102262 84 ntBASIC17.29■□□□□ 0.36
Clcn6O35454 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.29■□□□□ 0.36
Clcn6O35454 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.29■□□□□ 0.36
Clcn6O35454 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcn6O35454 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn6O35454 Gm18829-201ENSMUST00000188150 1622 ntBASIC17.29■□□□□ 0.36
Clcn6O35454 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
Clcn6O35454 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Clcn6O35454 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.28■□□□□ 0.36
Clcn6O35454 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clcn6O35454 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clcn6O35454 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn6O35454 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC17.28■□□□□ 0.36
Clcn6O35454 Gm44683-201ENSMUST00000209088 484 ntBASIC17.28■□□□□ 0.36
Clcn6O35454 AC140368.1-202ENSMUST00000226131 658 ntBASIC17.28■□□□□ 0.36
Clcn6O35454 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Clcn6O35454 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clcn6O35454 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Clcn6O35454 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn6O35454 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn6O35454 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Clcn6O35454 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn6O35454 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn6O35454 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn6O35454 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn6O35454 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clcn6O35454 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Clcn6O35454 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn6O35454 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC17.27■□□□□ 0.36
Clcn6O35454 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms