Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Gm28033-201ENSMUST00000184224 96 ntBASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11aO35305 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11aO35305 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11aO35305 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11aO35305 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms