Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col15a1O35206 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col15a1O35206 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Col15a1O35206 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col15a1O35206 Gm11025-201ENSMUST00000140773 466 ntBASIC20.51■□□□□ 0.87
Col15a1O35206 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.51■□□□□ 0.87
Col15a1O35206 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.51■□□□□ 0.87
Col15a1O35206 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.51■□□□□ 0.87
Col15a1O35206 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col15a1O35206 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col15a1O35206 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.51■□□□□ 0.87
Col15a1O35206 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.5■□□□□ 0.87
Col15a1O35206 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Col15a1O35206 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.5■□□□□ 0.87
Col15a1O35206 Gm27494-201ENSMUST00000184735 189 ntBASIC20.5■□□□□ 0.87
Col15a1O35206 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.5■□□□□ 0.87
Col15a1O35206 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.5■□□□□ 0.87
Col15a1O35206 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Col15a1O35206 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col15a1O35206 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col15a1O35206 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col15a1O35206 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Col15a1O35206 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Col15a1O35206 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col15a1O35206 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col15a1O35206 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.49■□□□□ 0.87
Col15a1O35206 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col15a1O35206 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.49■□□□□ 0.87
Col15a1O35206 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.49■□□□□ 0.87
Col15a1O35206 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.49■□□□□ 0.87
Col15a1O35206 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col15a1O35206 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.49■□□□□ 0.87
Col15a1O35206 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col15a1O35206 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.49■□□□□ 0.87
Col15a1O35206 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col15a1O35206 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Gm45612-201ENSMUST00000211320 160 ntBASIC20.48■□□□□ 0.87
Col15a1O35206 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Col15a1O35206 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col15a1O35206 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col15a1O35206 Gm15427-201ENSMUST00000117288 531 ntBASIC20.47■□□□□ 0.87
Col15a1O35206 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.47■□□□□ 0.87
Col15a1O35206 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.47■□□□□ 0.87
Col15a1O35206 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.47■□□□□ 0.87
Col15a1O35206 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Col15a1O35206 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col15a1O35206 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col15a1O35206 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Col15a1O35206 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col15a1O35206 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.46■□□□□ 0.87
Col15a1O35206 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.46■□□□□ 0.87
Col15a1O35206 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.46■□□□□ 0.87
Col15a1O35206 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col15a1O35206 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.46■□□□□ 0.87
Col15a1O35206 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms