Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Alx4O35137 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Alx4O35137 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Alx4O35137 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.37□□□□□ -0.11
Alx4O35137 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.37□□□□□ -0.11
Alx4O35137 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Alx4O35137 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.37□□□□□ -0.11
Alx4O35137 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Alx4O35137 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.36□□□□□ -0.11
Alx4O35137 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Gm715-201ENSMUST00000117865 831 ntBASIC14.36□□□□□ -0.11
Alx4O35137 Gm11336-201ENSMUST00000118168 334 ntBASIC14.36□□□□□ -0.11
Alx4O35137 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.36□□□□□ -0.11
Alx4O35137 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.36□□□□□ -0.11
Alx4O35137 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.36□□□□□ -0.11
Alx4O35137 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Alx4O35137 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Alx4O35137 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx4O35137 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.36□□□□□ -0.11
Alx4O35137 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Alx4O35137 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Alx4O35137 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Alx4O35137 Gm27011-201ENSMUST00000182352 972 ntBASIC14.35□□□□□ -0.11
Alx4O35137 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.35□□□□□ -0.11
Alx4O35137 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.35□□□□□ -0.11
Alx4O35137 Gm7370-201ENSMUST00000219471 767 ntBASIC14.35□□□□□ -0.11
Alx4O35137 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.35□□□□□ -0.11
Alx4O35137 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Alx4O35137 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx4O35137 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Alx4O35137 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx4O35137 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Alx4O35137 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Alx4O35137 Gm13474-201ENSMUST00000122466 815 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms