Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.11□□□□□ -0.79
Pkd1O08852 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.11□□□□□ -0.79
Pkd1O08852 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.11□□□□□ -0.79
Pkd1O08852 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pkd1O08852 Gm43630-201ENSMUST00000201550 776 ntBASIC10.11□□□□□ -0.79
Pkd1O08852 Gm7653-201ENSMUST00000214567 508 ntBASIC10.11□□□□□ -0.79
Pkd1O08852 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pkd1O08852 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pkd1O08852 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pkd1O08852 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pkd1O08852 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Gm12008-201ENSMUST00000117791 755 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Gm14719-201ENSMUST00000121891 340 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Gm7774-201ENSMUST00000200064 533 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Pkd1O08852 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC10.1□□□□□ -0.79
Pkd1O08852 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC10.1□□□□□ -0.79
Pkd1O08852 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Pkd1O08852 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Gm18187-201ENSMUST00000196476 984 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Gm7787-201ENSMUST00000216858 688 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Pkd1O08852 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pkd1O08852 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Pkd1O08852 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.1□□□□□ -0.79
Pkd1O08852 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.09□□□□□ -0.79
Pkd1O08852 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.09□□□□□ -0.79
Pkd1O08852 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Gm27989-201ENSMUST00000184721 107 ntBASIC10.09□□□□□ -0.79
Pkd1O08852 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.09□□□□□ -0.79
Pkd1O08852 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.09□□□□□ -0.79
Pkd1O08852 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.09□□□□□ -0.79
Pkd1O08852 Gm5779-201ENSMUST00000218467 910 ntBASIC10.09□□□□□ -0.79
Pkd1O08852 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.09□□□□□ -0.79
Pkd1O08852 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pkd1O08852 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pkd1O08852 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Pkd1O08852 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms