Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ebf3O08791 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ebf3O08791 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ebf3O08791 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Ebf3O08791 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ebf3O08791 Gm1401-201ENSMUST00000122048 772 ntBASIC16.67■□□□□ 0.26
Ebf3O08791 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ebf3O08791 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ebf3O08791 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ebf3O08791 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.67■□□□□ 0.26
Ebf3O08791 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf3O08791 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ebf3O08791 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ebf3O08791 Gm25745-201ENSMUST00000174945 133 ntBASIC16.66■□□□□ 0.26
Ebf3O08791 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.66■□□□□ 0.26
Ebf3O08791 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.66■□□□□ 0.26
Ebf3O08791 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.66■□□□□ 0.26
Ebf3O08791 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ebf3O08791 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.66■□□□□ 0.26
Ebf3O08791 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf3O08791 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.65■□□□□ 0.26
Ebf3O08791 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.65■□□□□ 0.26
Ebf3O08791 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.65■□□□□ 0.26
Ebf3O08791 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ebf3O08791 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ebf3O08791 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf3O08791 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Ebf3O08791 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ebf3O08791 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ebf3O08791 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.64■□□□□ 0.25
Ebf3O08791 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.64■□□□□ 0.25
Ebf3O08791 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.64■□□□□ 0.25
Ebf3O08791 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.64■□□□□ 0.25
Ebf3O08791 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ebf3O08791 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms