Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Mir8098-201ENSMUST00000184011 137 ntBASIC17.24■□□□□ 0.35
Usp35M0QWN7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.24■□□□□ 0.35
Usp35M0QWN7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp35M0QWN7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.23■□□□□ 0.35
Usp35M0QWN7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Gm5864-201ENSMUST00000202263 970 ntBASIC17.23■□□□□ 0.35
Usp35M0QWN7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.23■□□□□ 0.35
Usp35M0QWN7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp35M0QWN7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Usp35M0QWN7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp35M0QWN7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp35M0QWN7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp35M0QWN7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp35M0QWN7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp35M0QWN7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms