Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Gm7153-201ENSMUST00000117092 455 ntBASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.97□□□□□ -0.33
E030018B13RikJ3QMS9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Gm4459-201ENSMUST00000118750 468 ntBASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Gm27459-201ENSMUST00000184860 107 ntBASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
E030018B13RikJ3QMS9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
E030018B13RikJ3QMS9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm8825-201ENSMUST00000182565 998 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm4518-201ENSMUST00000182638 718 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
E030018B13RikJ3QMS9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms