Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Gm15794-201ENSMUST00000120182 631 ntBASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Dancr-204ENSMUST00000132389 2347 ntBASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-3J3QMG8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-3J3QMG8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav13d-3J3QMG8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms