Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh9F8VPK8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh9F8VPK8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh9F8VPK8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh9F8VPK8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh9F8VPK8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh9F8VPK8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh9F8VPK8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Mir7071-201ENSMUST00000184847 69 ntBASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh9F8VPK8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh9F8VPK8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms