Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.28■□□□□ 0.2
Ccdc149F6V035 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.28■□□□□ 0.2
Ccdc149F6V035 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.28■□□□□ 0.2
Ccdc149F6V035 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Gm27525-201ENSMUST00000184465 107 ntBASIC16.28■□□□□ 0.2
Ccdc149F6V035 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.28■□□□□ 0.2
Ccdc149F6V035 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccdc149F6V035 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc149F6V035 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc149F6V035 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.27■□□□□ 0.2
Ccdc149F6V035 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Gm6550-201ENSMUST00000187574 993 ntBASIC16.27■□□□□ 0.2
Ccdc149F6V035 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 AV026068-213ENSMUST00000223675 1171 ntBASIC16.27■□□□□ 0.2
Ccdc149F6V035 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc149F6V035 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc149F6V035 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Gm7222-201ENSMUST00000117512 906 ntBASIC16.26■□□□□ 0.19
Ccdc149F6V035 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc149F6V035 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms