Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Gm6257-201ENSMUST00000163864 910 ntBASIC19.28■□□□□ 0.68
Ube4aE9Q735 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.28■□□□□ 0.68
Ube4aE9Q735 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4aE9Q735 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4aE9Q735 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ube4aE9Q735 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ube4aE9Q735 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Ube4aE9Q735 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ube4aE9Q735 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.26■□□□□ 0.67
Ube4aE9Q735 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ube4aE9Q735 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Gm37153-201ENSMUST00000193637 231 ntBASIC19.26■□□□□ 0.67
Ube4aE9Q735 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4aE9Q735 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.25■□□□□ 0.67
Ube4aE9Q735 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm4995-201ENSMUST00000117247 432 ntBASIC19.25■□□□□ 0.67
Ube4aE9Q735 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm27702-201ENSMUST00000184512 56 ntBASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm2756-201ENSMUST00000195851 400 ntBASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.25■□□□□ 0.67
Ube4aE9Q735 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ube4aE9Q735 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms