Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.96□□□□□ -0.97
Herc1E9PZP8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Mir8109-201ENSMUST00000184375 117 ntBASIC8.96□□□□□ -0.97
Herc1E9PZP8 Nsd1-205ENSMUST00000224693 852 ntBASIC8.96□□□□□ -0.97
Herc1E9PZP8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Herc1E9PZP8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC8.96□□□□□ -0.98
Herc1E9PZP8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Herc1E9PZP8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC8.96□□□□□ -0.98
Herc1E9PZP8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Gm37374-201ENSMUST00000194954 1829 ntBASIC8.95□□□□□ -0.98
Herc1E9PZP8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Gm43545-201ENSMUST00000196765 2779 ntBASIC8.95□□□□□ -0.98
Herc1E9PZP8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc1E9PZP8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Snord83b-201ENSMUST00000104546 94 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm13461-201ENSMUST00000120980 662 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm9824-201ENSMUST00000178707 561 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm9728-201ENSMUST00000200197 1055 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm5161-201ENSMUST00000075243 853 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm29787-201ENSMUST00000222129 849 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 CU024892.2-201ENSMUST00000224608 832 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm6973-201ENSMUST00000117080 721 ntBASIC8.94□□□□□ -0.98
Herc1E9PZP8 Gm5187-201ENSMUST00000117317 991 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms