Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm44394-201ENSMUST00000199558 138 ntBASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Gm44484-201ENSMUST00000199873 138 ntBASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Gm44466-201ENSMUST00000200264 138 ntBASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Gm44359-201ENSMUST00000200671 138 ntBASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh17E9PXF0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 AW822252-206ENSMUST00000208904 237 ntBASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh17E9PXF0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh17E9PXF0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh17E9PXF0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms