Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 AC126408.1-201ENSMUST00000225184 523 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Gm22175-201ENSMUST00000175007 78 ntBASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Gpr146-202ENSMUST00000053120 1040 ntBASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hfm1D3Z4R1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC22.45■■□□□ 1.19
Hfm1D3Z4R1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Hfm1D3Z4R1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Hfm1D3Z4R1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Gm18246-201ENSMUST00000221023 728 ntBASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hfm1D3Z4R1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Gm11841-201ENSMUST00000117060 1963 ntBASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hfm1D3Z4R1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Gm27622-201ENSMUST00000183779 60 ntBASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hfm1D3Z4R1 Nudt18-203ENSMUST00000228768 1578 ntBASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hfm1D3Z4R1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hfm1D3Z4R1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Gm23547-201ENSMUST00000158210 271 ntBASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms