Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccnb1ip1D3Z3K2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccnb1ip1D3Z3K2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm44549-201ENSMUST00000208351 577 ntBASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.6□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ccnb1ip1D3Z3K2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms