Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Gm15794-201ENSMUST00000120182 631 ntBASIC17.05■□□□□ 0.32
Rfx8D3YU81 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.04■□□□□ 0.32
Rfx8D3YU81 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.04■□□□□ 0.32
Rfx8D3YU81 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx8D3YU81 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx8D3YU81 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.02■□□□□ 0.32
Rfx8D3YU81 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx8D3YU81 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rfx8D3YU81 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx8D3YU81 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx8D3YU81 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx8D3YU81 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx8D3YU81 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms