Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Mir1895-201ENSMUST00000122615 79 ntBASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Gm44335-201ENSMUST00000196879 141 ntBASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Gm44297-201ENSMUST00000198304 141 ntBASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Gm44346-201ENSMUST00000198851 141 ntBASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Gm8396-201ENSMUST00000057361 823 ntBASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Gm13616-201ENSMUST00000120600 222 ntBASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn7aB1AYL1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.6■□□□□ 0.89
Scn7aB1AYL1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Gm16198-201ENSMUST00000118766 670 ntBASIC20.59■□□□□ 0.89
Scn7aB1AYL1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Gm5312-201ENSMUST00000203728 547 ntBASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.59■□□□□ 0.89
Scn7aB1AYL1 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn7aB1AYL1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Gm8318-201ENSMUST00000182954 872 ntBASIC20.58■□□□□ 0.89
Scn7aB1AYL1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Scn7aB1AYL1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Rpph1-201ENSMUST00000175096 319 ntBASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.58■□□□□ 0.88
Scn7aB1AYL1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn7aB1AYL1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms