Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a6B1AVK5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Mir7023-201ENSMUST00000185093 64 ntBASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.43■□□□□ 0.22
Col4a6B1AVK5 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a6B1AVK5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Gm12008-201ENSMUST00000117791 755 ntBASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Gm16198-201ENSMUST00000118766 670 ntBASIC16.42■□□□□ 0.22
Col4a6B1AVK5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a6B1AVK5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.41■□□□□ 0.22
Col4a6B1AVK5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a6B1AVK5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a6B1AVK5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a6B1AVK5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.4■□□□□ 0.22
Col4a6B1AVK5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms