Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.1□□□□□ -0.47
Col6a5A6H584 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a5A6H584 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.09□□□□□ -0.47
Col6a5A6H584 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Gm24158-201ENSMUST00000175263 71 ntBASIC12.09□□□□□ -0.47
Col6a5A6H584 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Col6a5A6H584 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a5A6H584 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.08□□□□□ -0.47
Col6a5A6H584 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Col6a5A6H584 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.08□□□□□ -0.47
Col6a5A6H584 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.08□□□□□ -0.47
Col6a5A6H584 Gm29541-201ENSMUST00000191351 678 ntBASIC12.08□□□□□ -0.47
Col6a5A6H584 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.08□□□□□ -0.47
Col6a5A6H584 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a5A6H584 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a5A6H584 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Col6a5A6H584 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.08□□□□□ -0.48
Col6a5A6H584 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 Gm11425-201ENSMUST00000119608 498 ntBASIC12.08□□□□□ -0.48
Col6a5A6H584 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.08□□□□□ -0.48
Col6a5A6H584 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Col6a5A6H584 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a5A6H584 Gm45384-201ENSMUST00000210451 277 ntBASIC12.08□□□□□ -0.48
Col6a5A6H584 Gm9396-201ENSMUST00000076703 567 ntBASIC12.08□□□□□ -0.48
Col6a5A6H584 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a5A6H584 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Syt7-205ENSMUST00000224135 1557 ntBASIC12.07□□□□□ -0.48
Col6a5A6H584 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm16215-201ENSMUST00000161990 637 ntBASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.07□□□□□ -0.48
Col6a5A6H584 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.07□□□□□ -0.48
Col6a5A6H584 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm8410-201ENSMUST00000117225 605 ntBASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm12138-201ENSMUST00000122180 951 ntBASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a5A6H584 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col6a5A6H584 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Col6a5A6H584 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms