Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Chd6A3KFM7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chd6A3KFM7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chd6A3KFM7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.02□□□□□ -0.33
Chd6A3KFM7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.02□□□□□ -0.33
Chd6A3KFM7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd6A3KFM7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Gm45167-201ENSMUST00000208007 322 ntBASIC13.01□□□□□ -0.33
Chd6A3KFM7 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.01□□□□□ -0.33
Chd6A3KFM7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.01□□□□□ -0.33
Chd6A3KFM7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.01□□□□□ -0.33
Chd6A3KFM7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chd6A3KFM7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Chd6A3KFM7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13□□□□□ -0.33
Chd6A3KFM7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13□□□□□ -0.33
Chd6A3KFM7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Gm6858-201ENSMUST00000208582 1468 ntBASIC13□□□□□ -0.33
Chd6A3KFM7 Gm9200-201ENSMUST00000118513 1354 ntBASIC13□□□□□ -0.33
Chd6A3KFM7 Gm6018-201ENSMUST00000216090 1306 ntBASIC13□□□□□ -0.33
Chd6A3KFM7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13□□□□□ -0.33
Chd6A3KFM7 Mir8112-201ENSMUST00000184382 131 ntBASIC13□□□□□ -0.33
Chd6A3KFM7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Gm5112-201ENSMUST00000204407 2368 ntBASIC13□□□□□ -0.33
Chd6A3KFM7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Gm43272-201ENSMUST00000200599 1584 ntBASIC13□□□□□ -0.33
Chd6A3KFM7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd6A3KFM7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Gm38294-201ENSMUST00000192831 381 ntBASIC12.99□□□□□ -0.33
Chd6A3KFM7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.99□□□□□ -0.33
Chd6A3KFM7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.99□□□□□ -0.33
Chd6A3KFM7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms