Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Gm5312-201ENSMUST00000203728 547 ntBASIC13.52□□□□□ -0.25
Col6a4A2AX52 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.52□□□□□ -0.25
Col6a4A2AX52 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm7222-201ENSMUST00000117512 906 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm44335-201ENSMUST00000196879 141 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm44297-201ENSMUST00000198304 141 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm44346-201ENSMUST00000198851 141 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm27494-201ENSMUST00000184735 189 ntBASIC13.51□□□□□ -0.25
Col6a4A2AX52 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a4A2AX52 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.5□□□□□ -0.25
Col6a4A2AX52 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.5□□□□□ -0.25
Col6a4A2AX52 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.5□□□□□ -0.25
Col6a4A2AX52 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a4A2AX52 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.5□□□□□ -0.25
Col6a4A2AX52 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a4A2AX52 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms