Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Mir770-201ENSMUST00000103252 94 ntBASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Gm10013-201ENSMUST00000106074 672 ntBASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-2A0N8N6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Gm9987-201ENSMUST00000069768 567 ntBASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-2A0N8N6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms