Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm27459-201ENSMUST00000184860 107 ntBASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm27741-201ENSMUST00000185060 237 ntBASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mindy4b-psA0A1W2P7H6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms